Difference between revisions of "Template:Inverse codon table"

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imported>AlanM1
(The values marked as headings (Amino acid) should not be bolded, since they are already bolded by being marked headings (with '!'), resulting in ugly double-bolding.)
 
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{| class="wikitable" style="vertical-align:top;"
 
{| class="wikitable" style="vertical-align:top;"
|+ Inverse table (compressed using [[Nucleic acid notation|IUPAC notation]])
+
|+ Inverse table for the standard genetic code (compressed using [[Nucleic acid notation|IUPAC notation]])
! Amino Acid || Codons || Compressed
 
|rowspan=12|
 
! Amino Acid || Codons || Compressed
 
 
|-
 
|-
! style="text-align:center;"| '''Ala/A'''
+
! Amino acid !! DNA codons !! Compressed
 +
| rowspan=13 |
 +
! Amino acid !! DNA codons !! Compressed
 +
|-
 +
! style="text-align:center;"| Ala, A
 
| GC{{{T|T}}}, GCC, GCA, GCG
 
| GC{{{T|T}}}, GCC, GCA, GCG
 
| GCN
 
| GCN
! style="text-align:center;"| '''Leu/L'''
+
! style="text-align:center;"| Ile, I
| {{{T|T}}}{{{T|T}}}A, {{{T|T}}}{{{T|T}}}G, C{{{T|T}}}{{{T|T}}}, C{{{T|T}}}C, C{{{T|T}}}A, C{{{T|T}}}G
+
| A{{{T|T}}}{{{T|T}}}, A{{{T|T}}}C, A{{{T|T}}}A
| Y{{{T|T}}}R, C{{{T|T}}}N
+
| A{{{T|T}}}H
 
|-
 
|-
! style="text-align:center;"| '''Arg/R'''
+
! style="text-align:center;"| Arg, R
| CG{{{T|T}}}, CGC, CGA, CGG, AGA, AGG
+
| CG{{{T|T}}}, CGC, CGA, CGG; AGA, AGG
| CGN, MGR
+
| CGN, AGR; or<br/> CGY, MGR
! style="text-align:center;"| '''Lys/K'''
+
! style="text-align:center;"| Leu, L
| AAA, AAG
+
| C{{{T|T}}}{{{T|T}}}, C{{{T|T}}}C, C{{{T|T}}}A, C{{{T|T}}}G; {{{T|T}}}{{{T|T}}}A, {{{T|T}}}{{{T|T}}}G
| AAR
+
| C{{{T|T}}}N, {{{T|T}}}{{{T|T}}}R; or <br/>C{{{T|T}}}Y, Y{{{T|T}}}R
 
|-
 
|-
! style="text-align:center;"| '''Asn/N'''
+
! style="text-align:center;"| Asn, N
 
| AA{{{T|T}}}, AAC
 
| AA{{{T|T}}}, AAC
 
| AAY
 
| AAY
! style="text-align:center;| '''Met/M'''
+
! style="text-align:center;"| Lys, K
|colspan=2| A{{{T|T}}}G
+
| AAA, AAG
 +
| AAR
 
|-
 
|-
! style="text-align:center;"| '''Asp/D'''
+
! style="text-align:center;"| Asp, D
 
| GA{{{T|T}}}, GAC
 
| GA{{{T|T}}}, GAC
 
| GAY
 
| GAY
! style="text-align:center;"| '''Phe/F'''
+
! style="text-align:center;| Met, M
 +
|colspan=2| A{{{T|T}}}G
 +
|-
 +
! style="text-align:center;"| Asn or Asp, B
 +
| AA{{{T|T}}}, AAC; GA{{{T|T}}}, GAC
 +
| RAY
 +
! style="text-align:center;"| Phe, F
 
| {{{T|T}}}{{{T|T}}}{{{T|T}}}, {{{T|T}}}{{{T|T}}}C
 
| {{{T|T}}}{{{T|T}}}{{{T|T}}}, {{{T|T}}}{{{T|T}}}C
 
| {{{T|T}}}{{{T|T}}}Y
 
| {{{T|T}}}{{{T|T}}}Y
 
|-
 
|-
! style="text-align:center;"| '''Cys/C'''
+
! style="text-align:center;"| Cys, C
 
| {{{T|T}}}G{{{T|T}}}, {{{T|T}}}GC
 
| {{{T|T}}}G{{{T|T}}}, {{{T|T}}}GC
 
| {{{T|T}}}GY
 
| {{{T|T}}}GY
! style="text-align:center;"| '''Pro/P'''
+
! style="text-align:center;"| Pro, P
 
| CC{{{T|T}}}, CCC, CCA, CCG
 
| CC{{{T|T}}}, CCC, CCA, CCG
 
| CCN
 
| CCN
 
|-
 
|-
! style="text-align:center;"| '''Gln/Q'''
+
! style="text-align:center;"| Gln, Q
 
| CAA, CAG
 
| CAA, CAG
| CCR
+
| CAR
! style="text-align:center;"| '''Ser/S'''
+
! style="text-align:center;"| Ser, S
| {{{T|T}}}C{{{T|T}}}, {{{T|T}}}CC, {{{T|T}}}CA, {{{T|T}}}CG, AG{{{T|T}}}, AGC
+
| {{{T|T}}}C{{{T|T}}}, {{{T|T}}}CC, {{{T|T}}}CA, {{{T|T}}}CG; AG{{{T|T}}}, AGC
 
| {{{T|T}}}CN, AGY
 
| {{{T|T}}}CN, AGY
 
|-
 
|-
! style="text-align:center;"| '''Glu/E'''
+
! style="text-align:center;"| Glu, E
 
| GAA, GAG
 
| GAA, GAG
 
| GAR
 
| GAR
! style="text-align:center;"| '''Thr/T'''
+
! style="text-align:center;"| Thr, T
 
| AC{{{T|T}}}, ACC, ACA, ACG
 
| AC{{{T|T}}}, ACC, ACA, ACG
 
| ACN
 
| ACN
 
|-
 
|-
! style="text-align:center;"| '''Gly/G'''
+
! style="text-align:center;"| Gln or Glu, Z
 +
| CAA, CAG; GAA, GAG
 +
| SAR
 +
! style="text-align:center;"| Trp, W
 +
|colspan=2| {{{T|T}}}GG
 +
|-
 +
|-
 +
! style="text-align:center;"| Gly, G
 
| GG{{{T|T}}}, GGC, GGA, GGG
 
| GG{{{T|T}}}, GGC, GGA, GGG
 
| GGN
 
| GGN
! style="text-align:center;"| '''Trp/W'''
+
! style="text-align:center;"| Tyr, Y
|colspan=2| {{{T|T}}}GG
+
| {{{T|T}}}A{{{T|T}}}, {{{T|T}}}AC
 +
| {{{T|T}}}AY
 
|-
 
|-
! style="text-align:center;"| '''His/H'''
+
! style="text-align:center;"| His, H
 
| CA{{{T|T}}}, CAC
 
| CA{{{T|T}}}, CAC
 
| CAY
 
| CAY
! style="text-align:center;"| '''Tyr/Y'''
+
! style="text-align:center;"| Val, V
| {{{T|T}}}A{{{T|T}}}, {{{T|T}}}AC
 
| {{{T|T}}}AY
 
|-
 
! style="text-align:center;"| '''Ile/I'''
 
| A{{{T|T}}}{{{T|T}}}, A{{{T|T}}}C, A{{{T|T}}}A
 
| A{{{T|T}}}H
 
! style="text-align:center;"| '''Val/V'''
 
 
| G{{{T|T}}}{{{T|T}}}, G{{{T|T}}}C, G{{{T|T}}}A, G{{{T|T}}}G
 
| G{{{T|T}}}{{{T|T}}}, G{{{T|T}}}C, G{{{T|T}}}A, G{{{T|T}}}G
 
| G{{{T|T}}}N
 
| G{{{T|T}}}N
 
|-
 
|-
! style="text-align:center;"| '''START'''
+
! style="text-align:center;"| START
 
|colspan=2| A{{{T|T}}}G
 
|colspan=2| A{{{T|T}}}G
! style="text-align:center;"| '''STOP'''
+
! style="text-align:center;"| STOP
 
| {{{T|T}}}AA, {{{T|T}}}GA, {{{T|T}}}AG
 
| {{{T|T}}}AA, {{{T|T}}}GA, {{{T|T}}}AG
| {{{T|T}}}AR, {{{T|T}}}RA
+
| {{{T|T}}}RA, {{{T|T}}}AR
 
|}<noinclude>
 
|}<noinclude>
  
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It's referenced in a couple of places, so have a single master copy.
 
It's referenced in a couple of places, so have a single master copy.
 +
 +
[[Category:Biochemistry templates]]
 
}}</noinclude>
 
}}</noinclude>

Latest revision as of 00:07, 29 August 2020

Inverse table for the standard genetic code (compressed using IUPAC notation)
Amino acid DNA codons Compressed Amino acid DNA codons Compressed
Ala, A GCT, GCC, GCA, GCG GCN Ile, I ATT, ATC, ATA ATH
Arg, R CGT, CGC, CGA, CGG; AGA, AGG CGN, AGR; or
CGY, MGR
Leu, L CTT, CTC, CTA, CTG; TTA, TTG CTN, TTR; or
CTY, YTR
Asn, N AAT, AAC AAY Lys, K AAA, AAG AAR
Asp, D GAT, GAC GAY Met, M ATG
Asn or Asp, B AAT, AAC; GAT, GAC RAY Phe, F TTT, TTC TTY
Cys, C TGT, TGC TGY Pro, P CCT, CCC, CCA, CCG CCN
Gln, Q CAA, CAG CAR Ser, S TCT, TCC, TCA, TCG; AGT, AGC TCN, AGY
Glu, E GAA, GAG GAR Thr, T ACT, ACC, ACA, ACG ACN
Gln or Glu, Z CAA, CAG; GAA, GAG SAR Trp, W TGG
Gly, G GGT, GGC, GGA, GGG GGN Tyr, Y TAT, TAC TAY
His, H CAT, CAC CAY Val, V GTT, GTC, GTA, GTG GTN
START ATG STOP TAA, TGA, TAG TRA, TAR
Template documentation

This is the standard genetic code, in amino acid→codon form. By default it is the DNA code; for the RNA code (using Uracil rather than Thymine), add template parameter "T=U". Also listed are the compressed codon forme, using IUPAC nucleic acid notation.

It's referenced in a couple of places, so have a single master copy.